BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016B03SP1|AL426953
(856 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1753 1640 0.0
>3x_Contig1753
Length = 23959
Score = 1640 bits (817), Expect = 0.0
Identities = 840/857 (98%), Gaps = 1/857 (0%)
Strand = Plus / Minus
Query: 1 acaacctttcttctctttggatcgtaaaagacagtaaagaaggaggaaacaaatcaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17567 acaacctttcttctctttggatcgtaaaagacagtaaagaaggaggaaacaaatcaagat 17508
Query: 61 atttcttatttttcttgtaaattaaatcaaatttcaaactctctcatacaataaatcgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17507 atttcttatttttcttgtaaattaaatcaaatttcaaactctctcatacaataaatcgca 17448
Query: 121 ctagctgtccagagaaacagaagagaaaatttcgaaaaaacaaattaaaaaaaaaaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17447 ctagctgtccagagaaacagaagagaaaatttcgaaaaaacaaattaaaaaaaaaaaaag 17388
Query: 181 aattctgatgaaaaataggagacgattgtcattgtccacgaggcggas-agttgcggtaa 239
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 17387 aattctgatgaaaaataggagacgattgtcattgtccacgaggcggagcagttgcggtaa 17328
Query: 240 tggttttctagtggttacgtgggattcactgtacagctggrggggcggacttgcaattga 299
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 17327 tggttttctagtggttacgtgggattcactgtacagctggaggggcggacttgcaattga 17268
Query: 300 rggctttgtgaaggctggaagtttgatataacgttggtaggctgtcggtagaatagttat 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17267 aggctttgtgaaggctggaagtttgatataacgttggtaggctgtcggtagaatagttat 17208
Query: 360 wtcgtagtatattgtwttcatgaggcagttatcgatctctggatgttagtacatctggtt 419
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17207 atcgtagtatattgtattcatgaggcagttatcgatctctggatgttagtacatctggtt 17148
Query: 420 tattttmcmattcattatgaccgcatatcgtcttaatcctccgtatattamtgtgtatat 479
|||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 17147 tattttacaattcattatgaccgcatatcgtcttaatcctccgtatattaatgtgtatat 17088
Query: 480 tcamaatcacgtgacatatatgtmcgttacccggattathatgactcggcagttgamatc 539
||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||
Sbjct: 17087 tcaaaatcacgtgacatatatgtacgttacccggattataatgactcggcagttgaaatc 17028
Query: 540 tatacgtgaatatatgtyacgtggatcatcatcaactatcattgamgcaacgggaaggta 599
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 17027 tatacgtgaatatatgttacgtggatcatcatcaactatcattgaagcaacgggaaggta 16968
Query: 600 ttaatagatcaggttaatattcgacagtacatttatgtacatctatctctatctctgaag 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16967 ttaatagatcaggttaatattcgacagtacatttatgtacatctatctctatctctgaag 16908
Query: 660 aatctcacccacccattgtagaatggctggaaaatcgtccaagaagattgctgcaaagaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16907 aatctcacccacccattgtagaatggctggaaaatcgtccaagaagattgctgcaaagaa 16848
Query: 720 cgcagccatcttaaagcagttgcacgtactagtcgtcgctatactatcttthacgttatt 779
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 16847 cgcagccatcttaaagcagttgcacgtactagtcgtcgctatactatctttaacgttatt 16788
Query: 780 gaggaaatggttcagtaatgggctgatttcaaccctaaaacctattcttttcaatgtgcc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16787 gaggaaatggttcagtaatgggctgatttcaaccctaaaacctattcttttcaatgtgcc 16728
Query: 840 gatgttgttatktttat 856
||||||||||| |||||
Sbjct: 16727 gatgttgttatgtttat 16711
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,558
Number of Sequences: 1807
Number of extensions: 13558
Number of successful extensions: 722
Number of sequences better than 1.0e-20: 1
length of query: 856
length of database: 10,358,551
effective HSP length: 16
effective length of query: 840
effective length of database: 10,329,639
effective search space: 8676896760
effective search space used: 8676896760
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)